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deanbobo

Dean Bobo

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model1 qqplot
# mixed effect model for species richness over years model1 <- lmer( richness_scaled ~ observation_year_scaled * group_factored + duration_minutes_sum_scaled + num_localities_scaled + num_birders_scaled + num_checklists_scaled + (1 | observation_month), data = ebd_monthly_groups_summary )
wadden_reads
lakepulse_skhill_uriviricota
voigt_skhill_bp
palleja_mkhill_density
palleja_stacked_barchart_centrifuge_kraken
might want to redo it with bracken results
khill_kmer_size_v2
khill_kmer_size_v1
hotspot_comm_comp_freq
emiquon_pcoa_arisa
emiquon_nmds_arisa
mkhill_v_chla
mkhill_v_doc
khill_fig4_v3
khill_fig4_v2
uk_delta_emergence_v2
uk_delta_emergence
omicron_pangolin
newyork_scov2_april2024
walker_self_aaa
walker_aaa_khill
wwt_desc_rel_spec_rich
walker_mkhill_v1
walker-kmers-vs-bases
ny-khill-feb-2024
walker_2021_abiotic_nmds
eRNA-datasets-2018-2023
Emiquon 16s OTU NMDS
aus-honey-2024-01-11
bog turtle coverage summary
Shabarova_khill_metagenomes
gleon_ponds_lagoons-qc3
gleon_ponds_lagoons_qc2
gleon_ponds_lagoons
emiquon arisa with phychem data correlated
this plot is from unsummarized data. i.e. TT1, TT2, and TT3 were not averaged.
walker_shotgun_zoop_nmds
walker_bacteria_pre_post_accumulation_curve
green is pre flood. blue is post flood. only vernal ponds included. (river and main wetland excluded)
schwalbea_admixture
walker_fungal_orders
schwalbea_cov_density
schwalbea_pca
pangolin_v1
new_kveik
kveik-nmds-with-genes
kveik_sig_with_PC1
kviek-pca
aus-wt-pca
aus-wt-pca-colored
Kviek_samples PCA
Aussie_WT PCA
Shaborova 16s K-Hill
Thompson Phylum PCA
nmi18
nmi17
nmi16
nmi15
nmi14
yeast-all3-k20-admixture
nmi13
NY-khill-june2023v2
NY-khill-june2023
nmi12
nmi11
nmi10
nmi9
nmi8
nmi7
nmi6
nmi5
nmi4
nmi3
nmi2
nmi1
pot_gene_vs_not
thomson_water_16s_sem
Pathogens